Fix duplicate script file

idefix/tools/rasterize-lidar.py

@@ -1,99 +0,0 @@
-#!/usr/bin/env python
-# file rasterize-lidar.py
-# author Florent Guiotte <florent.guiotte@irisa.fr>
-# version 0.0
-# date 18 févr. 2021
-"""Create raster of LiDAR features.
-
-Use npz point clouds from Idefix.
-"""
-
-import json
-import argparse
-from multiprocessing import Pool
-from tqdm.auto import tqdm
-from pathlib import Path
-
-import idefix as ix
-
-parser = argparse.ArgumentParser(description='Compute features rasters from .npz point cloud.',
-                                 formatter_class=argparse.RawDescriptionHelpFormatter,
-                                 epilog="""
-The config file can contain any parameters of the
-idefix.helpers.rasterize function in a json file.
-
-You can define 'global' parameters (for all the rasters) and raster
-specific parameters in a list 'rasters'.
-
-See the following `config.json` example file:
-
-{
- "global": {
-  "resolution": 5,
-  "interpolation": "idw",
-  "out_dir": "./results"
- },
- "rasters": [
-  {
-   "feature": "elevation",
-   "bin_structure": "voxel",
-   "bin_method": "mean",
-   "squash_method": ["top", "bottom", "std"]
-  },
-  {
-   "feature": "elevation",
-   "bin_structure": "pixel",
-   "bin_method": "mean"
-  },
-  {
-   "bin_structure": "pixel",
-   "bin_method": "density"
-  },
-  {
-   "feature": "num_returns",
-   "bin_structure": "pixel",
-   "bin_method": "mode"
-  }
- ]
-}
-""")
-
-parser.add_argument('-c', '--config', type=str, help='json file to setup the rasterization processes', dest='c')
-parser.add_argument('-n', '--nprocess', type=int, help='number of child processes to use', default=1, dest='n')
-parser.add_argument('in_dir', type=str, help='the path to the point cloud directory')
-parser.add_argument('out_dir', type=str, help='path to output raster results')
-
-args = parser.parse_args()
-
-def _map_rasterize(kwargs):
-    return ix.helpers.rasterize(**kwargs)
-
-def main():
-    in_dir = Path(args.in_dir)
-    out_dir = Path(args.out_dir)
-    out_dir.mkdir(exist_ok=True)
-
-
-    pc_files = list(in_dir.glob('*.npz'))
-
-
-    config = {'global': {'out_dir': out_dir}}
-    config.update(json.load(open(args.c)) if args.c else {})
-
-    globalc = config['global']
-    rasters = config['rasters'] if 'rasters' in config else [{}]
-    
-    queue = []
-    for pc_file in pc_files:
-        for raster in rasters:
-            job = globalc.copy()
-            job.update(raster)
-            job.update({'pc_file': pc_file})
-            queue += [job]
-
-    pool = Pool(processes=args.n)
-    for _ in tqdm(pool.imap_unordered(_map_rasterize, queue), total=len(queue)):
-        pass
-
-if __name__ == '__main__':
-    main()

idefix/tools/rasterize.py

@@ -16,7 +16,7 @@ from pathlib import Path
 
 import idefix as ix
 
-parser = argparse.ArgumentParser(description='Compute features rasters from LiDAR point cloud.',
+parser = argparse.ArgumentParser(description='Compute features rasters from .npz point cloud.',
                                  formatter_class=argparse.RawDescriptionHelpFormatter,
                                  epilog="""
 The config file can contain any parameters of the
@@ -78,7 +78,7 @@ def main():
 
 
     config = {'global': {'out_dir': out_dir}}
-    config |= json.load(open(args.c)) if args.c else {}
+    config.update(json.load(open(args.c)) if args.c else {})
 
     globalc = config['global']
     rasters = config['rasters'] if 'rasters' in config else [{}]
@@ -87,8 +87,8 @@ def main():
     for pc_file in pc_files:
         for raster in rasters:
             job = globalc.copy()
-            job |= raster
+            job.update(raster)
-            job |= {'pc_file': pc_file}
+            job.update({'pc_file': pc_file})
             queue += [job]
 
     pool = Pool(processes=args.n)