LoadTIFF

ld2dap/LoadTIFF.py

@@ -0,0 +1,32 @@
+#!/usr/bin/python
+# -*- coding: utf-8 -*-
+# \file LoadTIFF.py
+# \brief TODO
+# \author Florent Guiotte <florent.guiotte@gmail.com>
+# \version 0.1
+# \date 04 avril 2018
+#
+# TODO details
+
+from core import Input
+import numpy as np
+
+## TODO: dep
+import sys
+sys.path.append('../triskele/python')
+import triskele
+
+class LoadTIFF(Input):
+    def __init__(self, tiffFiles):
+        super().__init__(self.__class__.__name__)
+        self.files = tiffFiles
+
+    def _process(self, data, metadata):
+        layers = list()
+
+        for file in self.files:
+            print('Loading {}'.format(file))
+            layers.append(triskele.read(file))
+
+        return np.stack(layers, axis=2), self.files
+

ld2dap/core/Filter.py

@@ -13,5 +13,5 @@ from .Output import Output
 
 class Filter(Output, Input):
     """Output should be first"""
-    def __init__(self):
+    def __init__(self, name='__CHILD__'):
-        super().__init__('Filter')
+        super().__init__('Filter:{}'.format(name))

ld2dap/core/Node.py

@@ -9,7 +9,7 @@
 # TODO details
 
 
-class Node:
+class Node(object):
     def __init__(self, name='A NODE HAS NO NAME'):
         self.name = name
 
@@ -20,7 +20,8 @@ class Node:
         self._process(data)
 
     def _process(self, data, metadata=None):
-        raise NotImplementedError('{} should override _process()'.format(self))
+        raise NotImplementedError(
+                '{} should override _process(self, data, metadata)'.format(self))
 
     def _run(self):
         raise NotImplementedError('{} should override _run()'.format(self))

ld2dap/test.py

@@ -9,12 +9,13 @@
 # TODO details
 
 from core import Input, Output, Filter
+from LoadTIFF import LoadTIFF
 
 def main():
-    i = Input()
+    i = LoadTIFF(['../Data/test.tiff'])
-    o = Output()
+    o = Output('o')
-    n = Filter()
+    n = Filter('n')
-    f = Filter()
+    f = Filter('f')
     print(n)
     #n.run()
     print(n.input)