{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "import numpy as np\n",
    "import ld2dap\n",
    "import triskele"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "load = ld2dap.LoadTIFF('../Data/phase1_rasters/Intensity_C1/UH17_GI1F051_TR.tif')\n",
    "trsh = ld2dap.Treshold(1e4)\n",
    "disp = ld2dap.ShowFig()\n",
    "rout = ld2dap.RawOutput()\n",
    "\n",
    "rout.input = trsh\n",
    "disp.input = trsh\n",
    "trsh.input = load\n",
    "\n",
    "disp.run()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "rinp = ld2dap.RawInput(rout.data.astype(np.uint16), rout.metadata)\n",
    "\n",
    "disp.input = rinp\n",
    "\n",
    "disp.run()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "aps = ld2dap.SelfDualAttributeProfiles(area=[100, 1e3], normalize_to_dtype=False)\n",
    "\n",
    "aps.input = rinp\n",
    "disp.input = aps\n",
    "\n",
    "disp.run()"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "## Try this new Normalize node !"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "load = ld2dap.LoadTIFF('../Data/phase1_rasters/Intensity_C1/UH17_GI1F051_TR.tif')\n",
    "trsh = ld2dap.Treshold(1e4)\n",
    "norm = ld2dap.Normalize(dtype=np.uint8)\n",
    "aps  = ld2dap.SelfDualAttributeProfiles(area=[100, 1e3], normalize_to_dtype=False)\n",
    "disp = ld2dap.ShowFig(stack_id='all')\n",
    "\n",
    "disp.input = aps\n",
    "aps.input  = norm\n",
    "norm.input = trsh\n",
    "trsh.input = load\n",
    "\n",
    "disp.run()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": []
  }
 ],
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   "file_extension": ".py",
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