Commit Graph

992 Commits

Author SHA1 Message Date
Jan van Gemert
a7f486fa7a
keep dark mode inside the (site.enable_darkmode) conditional (#3233)
Hi,
I noticed some weird behavior when I turned dark mode off (some of the
text seemed to disappear, it became white :) )

I traced it to: {% if site.enable_darkmode %} in head.liquid
where some darkmode features are place before the if statement.

When putting it inside the if statement then the weird behavior was
solved; see the pull request here :)

Cheers,
Jan
2025-07-21 11:27:21 -03:00
Eilam Shapira
9cda66f54e
Update README.md with my personal website (#3245) 2025-07-21 10:48:44 -03:00
Arthur Clerjon
f05d31bf8a
Update README.md (#3234)
Adding a new personal website
2025-07-16 18:02:09 -03:00
Abhilesh Dhawanjewar
47b982bd0d
Add sidenote examples, related posts and giscus to distill posts (#3103)
This PR adds a few stylistic improvements to the distill-style blog
posts:

- Update distill blog post example to showcase sidenotes as an
alternative to styles in PR #3077
- Showcase equations in sidenotes (closes #1242)
- Add `overrides.js` to match footnotes and citation styles with global
theme styling
- Add "related posts" sections if enabled to distill style posts
- Add "giscus" section if enabled to distill style posts



https://github.com/user-attachments/assets/b19a9cd9-779d-4d89-a4fb-eb14fb384480
2025-07-16 15:07:42 -03:00
George
2247ec3bf2
Fix socials (#3241)
Signed-off-by: George Araújo <george.gcac@gmail.com>
2025-07-16 14:45:23 -03:00
George
f9d8ab340c
Update CONTRIBUTING.md with adding social media info 2025-07-16 12:57:37 -03:00
Zhipeng He
f1406c47f7
Fix last row line number overflow issue in diff2html block (#3199)
Fix #3198 

Current:


![image](https://github.com/user-attachments/assets/dee68f6d-ee12-424b-947c-e5b6d153d157)

After fix:


![Image](https://github.com/user-attachments/assets/310606f4-4359-499d-8865-228d9d638465)
2025-07-16 12:26:38 -03:00
Guillaume Dalle
72eb0a345d
Add HAL id to socials (#3206)
Fixes #3205
2025-07-16 12:24:37 -03:00
Martin Bulla
2b97d46373
updated README.md by adding bullab page to labss (#3183) 2025-06-04 12:12:43 -03:00
George
ae741aaada
Fix toc issue (#3192)
Signed-off-by: George Araújo <george.gcac@gmail.com>
2025-06-03 17:53:06 -03:00
Lucas Bielak
d7ba3c209a
Update README.md (#3186)
added lab page to README
2025-06-03 13:54:30 -03:00
Mehrdad Noori (MeNo)
2dc1c4bd9c
Update README.md (#3185)
Hello Al-Folio Team,

I’ve been using the al-folio theme for my academic homepage and truly
appreciate how clean and elegant it is. I’ve just submitted a PR to add
my site (https://mehrdad-noori.github.io/) to the community list. Thank
you for all the hard work you put into this project!

Best regards,
Mehrdad
2025-06-03 13:47:37 -03:00
Christopher Bülte
bc0404c2e9
Added my academic website to the community pages. (#3184)
Thanks a lot for this great theme — I find it really clean and great for
hosting an academic website! I've added my customized academic page
(https://cbuelt.github.io/) to the community examples section, as
suggested. Thanks also for maintaining this project!
2025-06-01 20:30:35 -03:00
George
693c3beacb
Update docker image version in docker-compose.yml 2025-05-28 12:44:24 -03:00
George
169d0c2ee1
Update INSTALL.md docker version 2025-05-28 12:43:58 -03:00
George
e82520e4c2
Updated libraries versions (#3179)
Fix #3178

Signed-off-by: George Araújo <george.gcac@gmail.com>
2025-05-28 12:39:33 -03:00
alshedivat
5a5bb9e59c Auto update markdown TOC 2025-05-23 13:42:25 +00:00
Maruan
71969cce7e
Fix: Improve footnote and citation colors in Distill posts (#3172)
Fixes #3168. (Implemented by [jules.google](https://jules.google).)

This commit resolves issues with footnote and citation styling in
Distill posts, particularly ensuring that pop-up contents and the
numbers themselves respect the site's light/dark theme via shadow DOM
style definitions.

Key changes:

1.  **`d-hover-box` Internal Styling (template.v2.js):**
    The `<style>` tag within the `d-hover-box` component's template
    in `assets/js/distillpub/template.v2.js` has been updated.
    Styles for `.panel` (the main pop-up container) now define:
    - `background-color: var(--global-card-bg-color);`
    - `border: 1px solid var(--global-divider-color);`
    - `color: var(--global-text-color);` (for default text)
    - Links within the panel are styled with
      `color: var(--global-theme-color);` and
      `color: var(--global-hover-color);` on hover.
    This ensures pop-up content is correctly themed from within its
    shadow DOM.

2.  **Footnote/Citation Number Color (template.v2.js):**
    The hardcoded `hsla(206, 90%, 20%, 0.7)` color previously used for
    footnote numbers (in `d-footnote` template) and citation numbers
    (in `d-cite` template) in `assets/js/distillpub/template.v2.js`
    has been replaced with `color: var(--global-theme-color);`.

3.  **Cleaned `_sass/_distill.scss`:**
    Removed the (now redundant) global CSS overrides for `d-hover-box`
    from `_sass/_distill.scss`, as these styles are now correctly
    encapsulated within the `d-hover-box` component itself.

These changes ensure that all aspects of Distill footnotes and
citations (numbers, pop-up background, pop-up text, and links within
pop-ups) are styled using theme-aware CSS variables, providing
correct visual appearance and readability in both light and dark modes.

---------

Co-authored-by: google-labs-jules[bot] <161369871+google-labs-jules[bot]@users.noreply.github.com>
2025-05-23 06:42:09 -07:00
dependabot[bot]
dad01a8acd
Bump nokogiri from 1.18.5 to 1.18.8 (#3149)
Bumps [nokogiri](https://github.com/sparklemotion/nokogiri) from 1.18.5
to 1.18.8.
<details>
<summary>Release notes</summary>
<p><em>Sourced from <a
href="https://github.com/sparklemotion/nokogiri/releases">nokogiri's
releases</a>.</em></p>
<blockquote>
<h2>v1.18.8 / 2025-04-21</h2>
<h3>Security</h3>
<ul>
<li>[CRuby] Vendored libxml2 is updated to <a
href="https://gitlab.gnome.org/GNOME/libxml2/-/releases/v2.13.8">v2.13.8</a>
to address CVE-2025-32414 and CVE-2025-32415. See <a
href="https://github.com/sparklemotion/nokogiri/security/advisories/GHSA-5w6v-399v-w3cc">GHSA-5w6v-399v-w3cc</a>
for more information.</li>
</ul>
<!-- raw HTML omitted -->

<pre><code>36badd2eb281fca6214a5188e24a34399b15d89730639a068d12931e2adc210e
nokogiri-1.18.8-aarch64-linux-gnu.gem
664e0f9a77a7122a66d6c03abba7641ca610769a4728db55ee1706a0838b78a2
nokogiri-1.18.8-aarch64-linux-musl.gem
483b5b9fb33653f6f05cbe00d09ea315f268f0e707cfc809aa39b62993008212
nokogiri-1.18.8-arm64-darwin.gem
17de01ca3adf9f8e187883ed73c672344d3dbb3c260f88ffa1008e8dc255a28e
nokogiri-1.18.8-arm-linux-gnu.gem
6e6d7e71fc39572bd613a82d528cf54392c3de1ba5ce974f05c832b8187a040b
nokogiri-1.18.8-arm-linux-musl.gem
8c7464875d9ca7f71080c24c0db7bcaa3940e8be3c6fc4bcebccf8b9a0016365
nokogiri-1.18.8.gem
41002596960ff854198a20aaeb34cff0d445406d5ad85ba7ca9c3fd0c8f03de0
nokogiri-1.18.8-java.gem
11ab0f76772c5f2d718fb253fca5b74c6ef7628b72bbf8deba6ab1ffc93344cf
nokogiri-1.18.8-x64-mingw-ucrt.gem
024cdfe7d9ae3466bba6c06f348fb2a8395d9426b66a3c82f1961b907945cc0c
nokogiri-1.18.8-x86_64-darwin.gem
4a747875db873d18a2985ee2c320a6070c4a414ad629da625fbc58d1a20e5ecc
nokogiri-1.18.8-x86_64-linux-gnu.gem
ddd735fba49475a395b9ea793bb6474e3a3125b89960339604d08a5397de1165
nokogiri-1.18.8-x86_64-linux-musl.gem
</code></pre>
<h2>v1.18.7 / 2025-03-31</h2>
<h3>Dependencies</h3>
<ul>
<li>[CRuby] Vendored libxml2 is updated to <a
href="https://gitlab.gnome.org/GNOME/libxml2/-/releases/v2.13.7">v2.13.7</a>,
which is a bugfix release.</li>
</ul>
<!-- raw HTML omitted -->

<pre><code>57a064ab5440814a69a0e040817bd8154adea68a30d2ff2b3aa515a6a06dbb5f
nokogiri-1.18.7-aarch64-linux-gnu.gem
3e442dc5b69376e84288295fe37cbb890a21ad816a7e571e5e9967b3c1e30cd3
nokogiri-1.18.7-aarch64-linux-musl.gem
083abb2e9ed2646860f6b481a981485a658c6064caafaa81bf1cda1bada2e9d5
nokogiri-1.18.7-arm64-darwin.gem
337d9149deb5ae01022dff7c90f97bed81715fd586aacab0c5809ef933994c5e
nokogiri-1.18.7-arm-linux-gnu.gem
97a26edcc975f780a0822aaf7f7d7427c561067c1c9ee56bd3542960f0c28a6e
nokogiri-1.18.7-arm-linux-musl.gem
6b63ff5defe48f30d1d3b3122f65255ca91df2caf5378c6e0482ce73ff46fb31
nokogiri-1.18.7.gem
2cb83666f35619ec59d24d831bf492e49cfe27b112c222330ee929737f42f2eb
nokogiri-1.18.7-java.gem
681148fbc918aa5d54933d8b48aeb9462ab708d23409797ed750af961107f72b
nokogiri-1.18.7-x64-mingw-ucrt.gem
081d1aa517454ba3415304e2ea51fe411d6a3a809490d0c4aa42799cada417b7
nokogiri-1.18.7-x86_64-darwin.gem
3a0bf946eb2defde13d760f869b61bc8b0c18875afdd3cffa96543cfa3a18005
nokogiri-1.18.7-x86_64-linux-gnu.gem
9d83f8ec1fc37a305fa835d7ee61a4f37899e6ccc6dcb05be6645fa9797605af
nokogiri-1.18.7-x86_64-linux-musl.gem
</code></pre>
<h2>v1.18.6 / 2025-03-24</h2>
<h3>Fixed</h3>
<!-- raw HTML omitted -->
</blockquote>
<p>... (truncated)</p>
</details>
<details>
<summary>Changelog</summary>
<p><em>Sourced from <a
href="https://github.com/sparklemotion/nokogiri/blob/main/CHANGELOG.md">nokogiri's
changelog</a>.</em></p>
<blockquote>
<h2>v1.18.8 / 2025-04-21</h2>
<h3>Security</h3>
<ul>
<li>[CRuby] Vendored libxml2 is updated to <a
href="https://gitlab.gnome.org/GNOME/libxml2/-/releases/v2.13.8">v2.13.8</a>
to address CVE-2025-32414 and CVE-2025-32415. See <a
href="https://github.com/sparklemotion/nokogiri/security/advisories/GHSA-5w6v-399v-w3cc">GHSA-5w6v-399v-w3cc</a>
for more information.</li>
</ul>
<h2>v1.18.7 / 2025-03-31</h2>
<h3>Dependencies</h3>
<ul>
<li>[CRuby] Vendored libxml2 is updated to <a
href="https://gitlab.gnome.org/GNOME/libxml2/-/releases/v2.13.7">v2.13.7</a>,
which is a bugfix release.</li>
</ul>
<h2>v1.18.6 / 2025-03-24</h2>
<h3>Fixed</h3>
<ul>
<li>[JRuby] In HTML documents, <code>Node#attribute</code> now returns
the correct attribute. This has been broken, and returning
<code>nil</code>, since v1.17.0. (<a
href="https://redirect.github.com/sparklemotion/nokogiri/issues/3487">#3487</a>)
<a
href="https://github.com/flavorjones"><code>@​flavorjones</code></a></li>
</ul>
</blockquote>
</details>
<details>
<summary>Commits</summary>
<ul>
<li><a
href="9187f4af0d"><code>9187f4a</code></a>
version bump to v1.18.8</li>
<li><a
href="1deea041e3"><code>1deea04</code></a>
dep: libxml2 to v2.13.8 (branch <code>v1.18.x</code>) (<a
href="https://redirect.github.com/sparklemotion/nokogiri/issues/3509">#3509</a>)</li>
<li><a
href="6457fe6393"><code>6457fe6</code></a>
dep: libxml2 to v2.13.8</li>
<li><a
href="13e8aa4ef5"><code>13e8aa4</code></a>
version bump to v1.18.7</li>
<li><a
href="605699d271"><code>605699d</code></a>
dep: bump libxml2 to 2.13.7 (v1.18.x backport) (<a
href="https://redirect.github.com/sparklemotion/nokogiri/issues/3495">#3495</a>)</li>
<li><a
href="804e59038c"><code>804e590</code></a>
dep: bump libxml2 to 2.13.7</li>
<li><a
href="52bf15b62d"><code>52bf15b</code></a>
dep(dev): drop Rubocop from JRuby deps</li>
<li><a
href="189769d726"><code>189769d</code></a>
version bump to v1.18.6</li>
<li><a
href="de4982f0cc"><code>de4982f</code></a>
fix(jruby): Node#attribute in HTML documents (v1.18.x) (<a
href="https://redirect.github.com/sparklemotion/nokogiri/issues/3492">#3492</a>)</li>
<li><a
href="7d95b0f10c"><code>7d95b0f</code></a>
fix(jruby): Node#attribute in HTML documents</li>
<li>See full diff in <a
href="https://github.com/sparklemotion/nokogiri/compare/v1.18.5...v1.18.8">compare
view</a></li>
</ul>
</details>
<br />


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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2025-05-21 23:25:51 -07:00
Chen Chen
d6477e889f
Remove unnecessary rss_icon line from _config.yml (#3154)
Also make document clearer for rss_icon.
2025-05-21 23:25:11 -07:00
Mikolaj Kocikowski, PhD
659e1a39a5
Update README.md (#3162)
removed my website.
2025-05-21 23:24:34 -07:00
george-gca
ac99061bce Auto update markdown TOC 2025-05-12 19:49:17 +00:00
George
4f7da1d367
Removed link from header in FAQ.md 2025-05-12 16:48:58 -03:00
george-gca
8a70f13cb9 Auto update markdown TOC 2025-05-12 19:47:22 +00:00
George
55510343d4
Update INSTALL.md layout 2025-05-12 16:47:05 -03:00
George
a864cdca4b
Update CUSTOMIZE.md layout 2025-05-12 16:46:26 -03:00
george-gca
c98d596e2d Auto update markdown TOC 2025-05-12 19:46:12 +00:00
George
5878b5c71d
Update FAQ.md layout 2025-05-12 16:45:56 -03:00
George
58f4e02ab0
Changed order of params for gh-md-toc 2025-04-14 17:09:00 -03:00
George
78fdace28a
Update update-tocs.yml 2025-04-14 17:06:46 -03:00
George
c5bdfebd5b
Fixed tocs (#3133)
Signed-off-by: George Araújo <george.gcac@gmail.com>
2025-04-14 17:02:59 -03:00
George
e4d5b06dbb
Using fork of gh-md-toc 2025-04-14 16:48:15 -03:00
george-gca
b963b565bb Auto update markdown TOC 2025-04-14 18:43:53 +00:00
George
cc140ddc41
Update FAQ.md 2025-04-14 15:43:34 -03:00
george-gca
dfe4091c1c Auto update markdown TOC 2025-04-14 18:40:13 +00:00
George
91a2b63c80
Created GitHub action to update TOCs (#3132)
Signed-off-by: George Araújo <george.gcac@gmail.com>
2025-04-14 15:39:55 -03:00
Dian
15fad29f23
added my homepage (Dian Jiao). (#3128)
Hi!

I’m using the al-folio theme for my academic homepage and really
appreciate the work you’ve done — it’s clean, elegant, and super
helpful.

I’ve added my site (https://d-jiao.github.io) to the community list as
suggested. Thank you for maintaining this great project!

Best,
Dian Jiao (d-jiao)
2025-04-12 22:44:54 -03:00
Jos Zuijderwijk
d730fb3cb2
Added my website to the community pages. (#3119)
Thank you for this slick theme! I've added my customized page to the
community examples section. My implementation includes a few subtle
tweaks that might inspire others, just as I found inspiration from
existing community examples.
2025-04-10 14:16:38 -03:00
George
301132d2fd
Changed broken-links action to only run on main repo (#3118)
Signed-off-by: George Araújo <george.gcac@gmail.com>
2025-04-09 11:41:26 -03:00
George
351dcb985e
Fixed liquid variables in some js files (#3117)
Fixes #3095

---------

Signed-off-by: George Araújo <george.gcac@gmail.com>
2025-04-09 11:36:16 -03:00
Thomas Kahle
fea4b7c550
Fix "comma and and" before last author in publication list (#3107) 2025-04-03 07:34:21 -07:00
George
f68e88c5ef
Added support for plotly js (#3097)
Only now I realized that the [previous
support](https://alshedivat.github.io/al-folio/blog/2021/distill/#interactive-plots)
for [plotly](https://plotly.com/) was enabled by exporting an HTML from
python code. This adds support for
[plotly.js](https://plotly.com/javascript/).

---------

Signed-off-by: George Araújo <george.gcac@gmail.com>
2025-03-26 17:16:03 -03:00
George
81b3c60f00
Updated dependencies (#3091)
Signed-off-by: George Araújo <george.gcac@gmail.com>
2025-03-22 22:38:38 -03:00
Pranjal Aggarwal
a7b1f8c1b1
Re-add ability to exclude posts from search (#3089)
Earlier there was a tag in the `_config.yml` file to exclude the posts
from the search results. I could no longer find that option and hence
modified the `search.liquid.js` file.
It basically checks if the `posts_in_search` tag is true or not.
2025-03-22 22:11:34 -03:00
Nishanth Kumar
485e22fdf0
Add link to a new academic's website (#3075)
Love the theme and just used it for my own personal website! Thought I'd
link from here as suggested in the README to show my support! :)
2025-03-15 21:42:50 -03:00
Amir Pourmand
93aeb6d685
Update INSTALL.md (#3074)
Again, I saw this version problem with current version of our docker
image. Supposedly, there is some json package problem which I dealt
with.

But here is the overall solution to this problem for whoever is having
it.

---------

Co-authored-by: George <31376482+george-gca@users.noreply.github.com>
2025-03-14 10:38:19 -03:00
Hoe Jiun Tian
1dc670b02e
Fix typo in CUSTOMIZE.md (#3070)
`excludes` should be `exclude`. `excludes` with `s` does not work with
`_config.yml`, which itself uses `exclude` and `include`.
2025-03-13 11:06:51 -03:00
dependabot[bot]
9e837d6d0e
Bump json from 2.10.1 to 2.10.2 (#3066)
Bumps [json](https://github.com/ruby/json) from 2.10.1 to 2.10.2.
<details>
<summary>Release notes</summary>
<p><em>Sourced from <a
href="https://github.com/ruby/json/releases">json's
releases</a>.</em></p>
<blockquote>
<h2>v2.10.2</h2>
<h2>What's Changed</h2>
<ul>
<li>Fix a potential crash in the C extension parser.</li>
<li>Raise a ParserError on all incomplete unicode escape sequence. This
was the behavior until <code>2.10.0</code> unadvertently changed
it.</li>
<li>Ensure document snippets that are included in parser errors don't
include truncated multibyte characters.</li>
<li>Ensure parser error snippets are valid UTF-8.</li>
<li>Fix <code>JSON::GeneratorError#detailed_message</code> on Ruby &lt;
3.2</li>
</ul>
<p><strong>Full Changelog</strong>: <a
href="https://github.com/ruby/json/compare/v2.10.1...v2.10.2">https://github.com/ruby/json/compare/v2.10.1...v2.10.2</a></p>
</blockquote>
</details>
<details>
<summary>Changelog</summary>
<p><em>Sourced from <a
href="https://github.com/ruby/json/blob/master/CHANGES.md">json's
changelog</a>.</em></p>
<blockquote>
<h3>2025-03-12 (2.10.2)</h3>
<ul>
<li>Fix a potential crash in the C extension parser.</li>
<li>Raise a ParserError on all incomplete unicode escape sequence. This
was the behavior until <code>2.10.0</code> unadvertently changed
it.</li>
<li>Ensure document snippets that are included in parser errors don't
include truncated multibyte characters.</li>
<li>Ensure parser error snippets are valid UTF-8.</li>
<li>Fix <code>JSON::GeneratorError#detailed_message</code> on Ruby &lt;
3.2</li>
</ul>
</blockquote>
</details>
<details>
<summary>Commits</summary>
<ul>
<li><a
href="350c1fd154"><code>350c1fd</code></a>
Release 2.10.2</li>
<li><a
href="c56db31f80"><code>c56db31</code></a>
Merge commit from fork</li>
<li><a
href="cf242d89a0"><code>cf242d8</code></a>
Fix potential out of bound read in
<code>json_string_unescape</code>.</li>
<li><a
href="57911f1ecf"><code>57911f1</code></a>
Merge pull request <a
href="https://redirect.github.com/ruby/json/issues/762">#762</a> from
byroot/invalid-escape</li>
<li><a
href="7d0637b9e6"><code>7d0637b</code></a>
Raise a ParserError on all incomplete unicode escape sequence.</li>
<li><a
href="c079793b76"><code>c079793</code></a>
Avoid fast-path IO writes when IO has ext enc</li>
<li><a
href="ac30b69c06"><code>ac30b69</code></a>
Merge pull request <a
href="https://redirect.github.com/ruby/json/issues/757">#757</a> from
rahim/fix-generator-error-no-method-error</li>
<li><a
href="2e015ff839"><code>2e015ff</code></a>
Fix JSON::GeneratorError#detailed_message with Ruby &lt; 3.2</li>
<li><a
href="f3e113654f"><code>f3e1136</code></a>
Merge pull request <a
href="https://redirect.github.com/ruby/json/issues/756">#756</a> from
byroot/utf8-snippets</li>
<li><a
href="e144793b72"><code>e144793</code></a>
Ensure parser error snippets are valid UTF-8</li>
<li>Additional commits viewable in <a
href="https://github.com/ruby/json/compare/v2.10.1...v2.10.2">compare
view</a></li>
</ul>
</details>
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2025-03-12 13:11:59 -03:00
George
afc34968a7
Fixed docs (#3059)
Signed-off-by: George Araújo <george.gcac@gmail.com>
2025-03-11 12:09:51 -03:00
George
82b2ad388f
Fix scrollbar color (#3058)
Fixes #3055

Signed-off-by: George Araújo <george.gcac@gmail.com>
2025-03-11 11:42:08 -03:00